Protein–RNA interactions for Protein: Q8BKI2

Tnrc6b, Trinucleotide repeat-containing gene 6B protein, mousemouse

Known RBP Predictions only

Length 1,810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6bQ8BKI2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm13916-201ENSMUST00000117368 628 ntBASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm15207-201ENSMUST00000119259 442 ntBASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm15566-201ENSMUST00000121130 590 ntBASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm5706-201ENSMUST00000181525 993 ntBASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm5714-201ENSMUST00000197343 566 ntBASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm43058-201ENSMUST00000197645 625 ntBASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm6867-201ENSMUST00000219165 425 ntBASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm11836-201ENSMUST00000121022 441 ntBASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm8492-201ENSMUST00000182375 987 ntBASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tnrc6bQ8BKI2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Tnrc6bQ8BKI2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Gm22920-201ENSMUST00000102175 109 ntBASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Gm11663-201ENSMUST00000117888 290 ntBASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC16.39■□□□□ 0.21
Tnrc6bQ8BKI2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Gm24844-201ENSMUST00000158679 127 ntBASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Gm18893-201ENSMUST00000198416 943 ntBASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Gm2553-201ENSMUST00000215986 605 ntBASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Gm24891-201ENSMUST00000104391 136 ntBASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC16.38■□□□□ 0.21
Tnrc6bQ8BKI2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Tnrc6bQ8BKI2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tnrc6bQ8BKI2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnrc6bQ8BKI2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC16.37■□□□□ 0.21
Tnrc6bQ8BKI2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnrc6bQ8BKI2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms