Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Gm4271-201ENSMUST00000174444 973 ntBASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Gm27331-201ENSMUST00000183705 60 ntBASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Gm29705-201ENSMUST00000212598 474 ntBASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Gm6091-201ENSMUST00000098307 165 ntBASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Gm26185-201ENSMUST00000157692 266 ntBASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Clrn3Q8BHH8 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gm8805-201ENSMUST00000117848 313 ntBASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gm14921-201ENSMUST00000118643 908 ntBASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gm12291-201ENSMUST00000121627 311 ntBASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gm17150-201ENSMUST00000165577 381 ntBASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gm5745-201ENSMUST00000183748 313 ntBASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms