Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.85□□□□□ -0.03
Samm50Q8BGH2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Gm14660-201ENSMUST00000119809 575 ntBASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Samm50Q8BGH2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Samm50Q8BGH2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Samm50Q8BGH2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Samm50Q8BGH2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Gm12742-201ENSMUST00000117326 410 ntBASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Gm12384-201ENSMUST00000119228 919 ntBASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Gm4271-201ENSMUST00000174444 973 ntBASIC14.83□□□□□ -0.04
Samm50Q8BGH2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Samm50Q8BGH2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Gm16177-201ENSMUST00000120728 718 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms