Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Mir7085-201ENSMUST00000184353 66 ntBASIC12.35□□□□□ -0.43
Trim50Q810I2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.34□□□□□ -0.43
Trim50Q810I2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Mir1982-201ENSMUST00000157368 74 ntBASIC12.34□□□□□ -0.43
Trim50Q810I2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.34□□□□□ -0.43
Trim50Q810I2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.34□□□□□ -0.43
Trim50Q810I2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.34□□□□□ -0.43
Trim50Q810I2 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.34□□□□□ -0.43
Trim50Q810I2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.34□□□□□ -0.43
Trim50Q810I2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim50Q810I2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim50Q810I2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.33□□□□□ -0.44
Trim50Q810I2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.33□□□□□ -0.44
Trim50Q810I2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Gm25927-201ENSMUST00000175058 117 ntBASIC12.33□□□□□ -0.44
Trim50Q810I2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.33□□□□□ -0.44
Trim50Q810I2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim50Q810I2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim50Q810I2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms