Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Gm7848-201ENSMUST00000210739 718 ntBASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Gm18730-201ENSMUST00000218038 343 ntBASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp6nlQ80XC3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm15703-201ENSMUST00000120250 880 ntBASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm18734-201ENSMUST00000172937 808 ntBASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Usp6nlQ80XC3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Usp6nlQ80XC3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Usp6nlQ80XC3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp6nlQ80XC3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Usp6nlQ80XC3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp6nlQ80XC3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp6nlQ80XC3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp6nlQ80XC3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
Usp6nlQ80XC3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.95□□□□□ -0.18
Usp6nlQ80XC3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms