Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp8Q80U87 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.72□□□□□ -0.37
Usp8Q80U87 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Usp8Q80U87 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Usp8Q80U87 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.72□□□□□ -0.37
Usp8Q80U87 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.72□□□□□ -0.37
Usp8Q80U87 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Gm12091-201ENSMUST00000146791 830 ntBASIC12.72□□□□□ -0.37
Usp8Q80U87 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Usp8Q80U87 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.72□□□□□ -0.37
Usp8Q80U87 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp8Q80U87 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp8Q80U87 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp8Q80U87 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Usp8Q80U87 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.71□□□□□ -0.37
Usp8Q80U87 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp8Q80U87 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Mir686-201ENSMUST00000102174 109 ntBASIC12.71□□□□□ -0.37
Usp8Q80U87 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp8Q80U87 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp8Q80U87 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.71□□□□□ -0.37
Usp8Q80U87 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Usp8Q80U87 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Usp8Q80U87 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.71□□□□□ -0.37
Usp8Q80U87 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp8Q80U87 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp8Q80U87 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
Usp8Q80U87 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Usp8Q80U87 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp8Q80U87 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Usp8Q80U87 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp8Q80U87 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Usp8Q80U87 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp8Q80U87 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.71□□□□□ -0.38
Usp8Q80U87 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp8Q80U87 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Usp8Q80U87 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Usp8Q80U87 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp8Q80U87 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp8Q80U87 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.71□□□□□ -0.38
Usp8Q80U87 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Usp8Q80U87 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.7□□□□□ -0.38
Usp8Q80U87 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.7□□□□□ -0.38
Usp8Q80U87 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Usp8Q80U87 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Usp8Q80U87 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.7□□□□□ -0.38
Usp8Q80U87 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.7□□□□□ -0.38
Usp8Q80U87 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Usp8Q80U87 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.7□□□□□ -0.38
Usp8Q80U87 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.7□□□□□ -0.38
Usp8Q80U87 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.7□□□□□ -0.38
Usp8Q80U87 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms