Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.76□□□□□ -0.53
Pif1Q80SX8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.76□□□□□ -0.53
Pif1Q80SX8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Gm38317-201ENSMUST00000195564 343 ntBASIC11.76□□□□□ -0.53
Pif1Q80SX8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.76□□□□□ -0.53
Pif1Q80SX8 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.76□□□□□ -0.53
Pif1Q80SX8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pif1Q80SX8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Gm26670-201ENSMUST00000180429 3287 ntBASIC11.75□□□□□ -0.53
Pif1Q80SX8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Gm11930-201ENSMUST00000117788 190 ntBASIC11.75□□□□□ -0.53
Pif1Q80SX8 Gm14130-201ENSMUST00000118417 987 ntBASIC11.75□□□□□ -0.53
Pif1Q80SX8 Gm14277-201ENSMUST00000121195 360 ntBASIC11.75□□□□□ -0.53
Pif1Q80SX8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Gm19931-201ENSMUST00000198920 368 ntBASIC11.75□□□□□ -0.53
Pif1Q80SX8 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.75□□□□□ -0.53
Pif1Q80SX8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Nsd1-205ENSMUST00000224693 852 ntBASIC11.75□□□□□ -0.53
Pif1Q80SX8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.75□□□□□ -0.53
Pif1Q80SX8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms