Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm13492-201ENSMUST00000119772 665 ntBASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm30285-201ENSMUST00000214614 422 ntBASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh8Q7TSK3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm31256-201ENSMUST00000194705 506 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Mir433-201ENSMUST00000093564 124 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh8Q7TSK3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms