Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Gm14999-201ENSMUST00000121039 624 ntBASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Gm27046-201ENSMUST00000182160 463 ntBASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Gm18056-201ENSMUST00000207670 568 ntBASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Gm18061-201ENSMUST00000208350 562 ntBASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Gm18063-201ENSMUST00000208529 568 ntBASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Gm18052-201ENSMUST00000208750 559 ntBASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubfd1Q78JW9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Gm14109-201ENSMUST00000118814 309 ntBASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Gm13315-201ENSMUST00000120376 991 ntBASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Rmrp-201ENSMUST00000157463 271 ntBASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Gm38317-201ENSMUST00000195564 343 ntBASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Gm10076-201ENSMUST00000073238 384 ntBASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubfd1Q78JW9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms