Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gm44647-201ENSMUST00000207402 428 ntBASIC10.69□□□□□ -0.7
Rif1Q6PR54 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.69□□□□□ -0.7
Rif1Q6PR54 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gm43520-201ENSMUST00000197996 164 ntBASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gm43997-201ENSMUST00000203986 1005 ntBASIC10.69□□□□□ -0.7
Rif1Q6PR54 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.69□□□□□ -0.7
Rif1Q6PR54 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gm15620-201ENSMUST00000122949 270 ntBASIC10.68□□□□□ -0.7
Rif1Q6PR54 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.68□□□□□ -0.7
Rif1Q6PR54 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gm26957-201ENSMUST00000182645 977 ntBASIC10.68□□□□□ -0.7
Rif1Q6PR54 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.68□□□□□ -0.7
Rif1Q6PR54 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rif1Q6PR54 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rif1Q6PR54 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rif1Q6PR54 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Rif1Q6PR54 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.67□□□□□ -0.7
Rif1Q6PR54 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rif1Q6PR54 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.67□□□□□ -0.7
Rif1Q6PR54 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms