Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Gm2546-201ENSMUST00000182630 991 ntBASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Gm45925-201ENSMUST00000218882 744 ntBASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd1Q6PIP5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nudcd1Q6PIP5 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.77□□□□□ -0.36
Nudcd1Q6PIP5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Nudcd1Q6PIP5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nudcd1Q6PIP5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Gm12058-201ENSMUST00000118614 437 ntBASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Gm15808-201ENSMUST00000119046 604 ntBASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Gm13813-201ENSMUST00000120998 787 ntBASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Gm5950-201ENSMUST00000213337 772 ntBASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd1Q6PIP5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Gm11531-201ENSMUST00000117614 555 ntBASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Nudcd1Q6PIP5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms