Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc85bQ6PDY0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Mir6546-201ENSMUST00000184460 62 ntBASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Gm37028-201ENSMUST00000194276 107 ntBASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc85bQ6PDY0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Gm23251-201ENSMUST00000103773 110 ntBASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Gm23153-201ENSMUST00000175323 313 ntBASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Gm45550-201ENSMUST00000209380 946 ntBASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Gm45598-202ENSMUST00000210719 986 ntBASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc85bQ6PDY0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc85bQ6PDY0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms