Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Gm5847-201ENSMUST00000178959 1595 ntBASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 AC151275.1-201ENSMUST00000224870 585 ntBASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Gm22711-201ENSMUST00000116890 133 ntBASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Gm9062-201ENSMUST00000117712 727 ntBASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Gm8194-201ENSMUST00000159783 859 ntBASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chd4Q6PDQ2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chd4Q6PDQ2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Chd4Q6PDQ2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Chd4Q6PDQ2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Chd4Q6PDQ2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chd4Q6PDQ2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 AC154290.1-201ENSMUST00000223786 1240 ntBASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd4Q6PDQ2 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm15725-201ENSMUST00000119947 1090 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm15881-201ENSMUST00000148792 942 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm3150-201ENSMUST00000166418 204 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm12407-201ENSMUST00000180219 324 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm5706-201ENSMUST00000181525 993 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm38151-201ENSMUST00000195085 289 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm8956-201ENSMUST00000203939 825 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm15573-201ENSMUST00000119487 540 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm4034-201ENSMUST00000187674 480 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm43184-201ENSMUST00000197247 542 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm17831-201ENSMUST00000205579 900 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 AC166344.1-201ENSMUST00000223745 674 ntBASIC16.19■□□□□ 0.18
Chd4Q6PDQ2 Gm26448-201ENSMUST00000082446 203 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms