Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Gm14760-201ENSMUST00000121831 999 ntBASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.97□□□□□ -0.17
Krt39Q6IFX4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Krt39Q6IFX4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Krt39Q6IFX4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.96□□□□□ -0.18
Krt39Q6IFX4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Krt39Q6IFX4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Krt39Q6IFX4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Krt39Q6IFX4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Gm13612-201ENSMUST00000119276 390 ntBASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Gm15806-201ENSMUST00000120696 955 ntBASIC13.95□□□□□ -0.18
Krt39Q6IFX4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Gm9002-201ENSMUST00000178437 499 ntBASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Gm19184-201ENSMUST00000196798 928 ntBASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms