Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.21□□□□□ -0.45
Sdc3Q64519 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sdc3Q64519 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sdc3Q64519 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sdc3Q64519 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Sdc3Q64519 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sdc3Q64519 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sdc3Q64519 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Sdc3Q64519 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sdc3Q64519 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.2□□□□□ -0.46
Sdc3Q64519 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sdc3Q64519 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.2□□□□□ -0.46
Sdc3Q64519 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.2□□□□□ -0.46
Sdc3Q64519 Gm15370-201ENSMUST00000117158 253 ntBASIC12.2□□□□□ -0.46
Sdc3Q64519 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.2□□□□□ -0.46
Sdc3Q64519 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.2□□□□□ -0.46
Sdc3Q64519 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.2□□□□□ -0.46
Sdc3Q64519 Gm29396-201ENSMUST00000185659 716 ntBASIC12.2□□□□□ -0.46
Sdc3Q64519 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Gm43822-201ENSMUST00000200285 476 ntBASIC12.2□□□□□ -0.46
Sdc3Q64519 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.2□□□□□ -0.46
Sdc3Q64519 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.2□□□□□ -0.46
Sdc3Q64519 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Sdc3Q64519 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.2□□□□□ -0.46
Sdc3Q64519 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sdc3Q64519 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Sdc3Q64519 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.19□□□□□ -0.46
Sdc3Q64519 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sdc3Q64519 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Sdc3Q64519 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.19□□□□□ -0.46
Sdc3Q64519 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Snord83b-201ENSMUST00000104546 94 ntBASIC12.19□□□□□ -0.46
Sdc3Q64519 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.19□□□□□ -0.46
Sdc3Q64519 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.19□□□□□ -0.46
Sdc3Q64519 Gm38266-201ENSMUST00000194931 421 ntBASIC12.19□□□□□ -0.46
Sdc3Q64519 Gm18584-201ENSMUST00000203098 964 ntBASIC12.19□□□□□ -0.46
Sdc3Q64519 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sdc3Q64519 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.19□□□□□ -0.46
Sdc3Q64519 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.19□□□□□ -0.46
Sdc3Q64519 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sdc3Q64519 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sdc3Q64519 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sdc3Q64519 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms