Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Mir339-201ENSMUST00000083659 96 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.63□□□□□ -0.87
Zfp248Q640N4 Gm14704-201ENSMUST00000120300 874 ntBASIC9.63□□□□□ -0.87
Zfp248Q640N4 Gm26185-201ENSMUST00000157692 266 ntBASIC9.63□□□□□ -0.87
Zfp248Q640N4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.63□□□□□ -0.87
Zfp248Q640N4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Gm45384-201ENSMUST00000210451 277 ntBASIC9.63□□□□□ -0.87
Zfp248Q640N4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Gm6180-201ENSMUST00000065243 498 ntBASIC9.63□□□□□ -0.87
Zfp248Q640N4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Gm5356-201ENSMUST00000093326 615 ntBASIC9.63□□□□□ -0.87
Zfp248Q640N4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Zfp248Q640N4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Zfp248Q640N4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.62□□□□□ -0.87
Zfp248Q640N4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Gm8805-201ENSMUST00000117848 313 ntBASIC9.62□□□□□ -0.87
Zfp248Q640N4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Gm11637-201ENSMUST00000120601 592 ntBASIC9.62□□□□□ -0.87
Zfp248Q640N4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Zfp248Q640N4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.62□□□□□ -0.87
Zfp248Q640N4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms