Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Gm24255-201ENSMUST00000104481 128 ntBASIC15.17■□□□□ 0.02
Vps54Q5SPW0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Gm37201-201ENSMUST00000191845 523 ntBASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps54Q5SPW0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Gm22323-201ENSMUST00000103832 109 ntBASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Rmrp-201ENSMUST00000157463 271 ntBASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.16■□□□□ 0.02
Vps54Q5SPW0 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps54Q5SPW0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Gm24231-201ENSMUST00000104315 133 ntBASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Vps54Q5SPW0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms