Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Gm14921-201ENSMUST00000118643 908 ntBASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Gm12363-201ENSMUST00000122250 668 ntBASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Gm4768-201ENSMUST00000206199 686 ntBASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Gm19163-201ENSMUST00000223313 780 ntBASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav5d-4Q5R1F6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Snord83b-201ENSMUST00000104546 94 ntBASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms