Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gm5425-201ENSMUST00000214125 459 ntBASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3-3Q5R1C3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm5566-201ENSMUST00000116118 459 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm14494-201ENSMUST00000118786 435 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms