Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Gm27046-201ENSMUST00000182160 463 ntBASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Gm3096-201ENSMUST00000185770 364 ntBASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Gm13097-201ENSMUST00000210722 397 ntBASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Mir433-201ENSMUST00000093564 124 ntBASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Gm14109-201ENSMUST00000118814 309 ntBASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Rc3h1Q4VGL6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm12314-201ENSMUST00000118104 538 ntBASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm15276-201ENSMUST00000145953 498 ntBASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm27023-201ENSMUST00000182372 285 ntBASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.61□□□□□ -0.07
Rc3h1Q4VGL6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms