Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.71□□□□□ -0.38
Fam196aQ3USH1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fam196aQ3USH1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Fam196aQ3USH1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fam196aQ3USH1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.71□□□□□ -0.38
Fam196aQ3USH1 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.71□□□□□ -0.38
Fam196aQ3USH1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm13182-201ENSMUST00000122241 312 ntBASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.7□□□□□ -0.38
Fam196aQ3USH1 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm5621-201ENSMUST00000187303 640 ntBASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.7□□□□□ -0.38
Fam196aQ3USH1 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm17831-201ENSMUST00000205579 900 ntBASIC12.7□□□□□ -0.38
Fam196aQ3USH1 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm8325-201ENSMUST00000099086 453 ntBASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fam196aQ3USH1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm11989-201ENSMUST00000117240 672 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm11362-201ENSMUST00000118838 850 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm12899-201ENSMUST00000120565 551 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm14585-201ENSMUST00000120713 634 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm25545-201ENSMUST00000122673 323 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm22442-201ENSMUST00000157256 144 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm22877-201ENSMUST00000175451 105 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm807-202ENSMUST00000224929 408 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.69□□□□□ -0.38
Fam196aQ3USH1 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms