Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm6447-201ENSMUST00000118905 835 ntBASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Gm12341-201ENSMUST00000119724 503 ntBASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Gm23984-201ENSMUST00000157139 203 ntBASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa3Q3UPR0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gm36982-201ENSMUST00000193796 1128 ntBASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gm18018-201ENSMUST00000198273 408 ntBASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 AC154757.2-201ENSMUST00000228885 743 ntBASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gm6180-201ENSMUST00000065243 498 ntBASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Shisa3Q3UPR0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Gm13333-201ENSMUST00000119424 781 ntBASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Gm14126-201ENSMUST00000122345 395 ntBASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Shisa3Q3UPR0 Gm12091-201ENSMUST00000146791 830 ntBASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms