Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Gm11511-201ENSMUST00000118146 540 ntBASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Gm42629-201ENSMUST00000199063 1102 ntBASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Gm18711-201ENSMUST00000199341 750 ntBASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Gm10288-201ENSMUST00000084614 537 ntBASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Arhgef40Q3UPH7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Arhgef40Q3UPH7 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Arhgef40Q3UPH7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC18.27■□□□□ 0.52
Arhgef40Q3UPH7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Arhgef40Q3UPH7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC18.27■□□□□ 0.52
Arhgef40Q3UPH7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Arhgef40Q3UPH7 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Arhgef40Q3UPH7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Gm38228-201ENSMUST00000193169 1293 ntBASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 AC158355.1-201ENSMUST00000215895 1705 ntBASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Arhgef40Q3UPH7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC18.26■□□□□ 0.51
Arhgef40Q3UPH7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Gm5705-201ENSMUST00000066241 711 ntBASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Gm10152-201ENSMUST00000193475 1344 ntBASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Gm38391-201ENSMUST00000191720 4069 ntBASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Gm8038-201ENSMUST00000164674 2044 ntBASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Arhgef40Q3UPH7 Gm43267-201ENSMUST00000199664 1796 ntBASIC18.24■□□□□ 0.51
Arhgef40Q3UPH7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Arhgef40Q3UPH7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Arhgef40Q3UPH7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Arhgef40Q3UPH7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Arhgef40Q3UPH7 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Arhgef40Q3UPH7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Arhgef40Q3UPH7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC18.24■□□□□ 0.51
Arhgef40Q3UPH7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Arhgef40Q3UPH7 Gm8956-201ENSMUST00000203939 825 ntBASIC18.24■□□□□ 0.51
Arhgef40Q3UPH7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms