Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.62□□□□□ -0.55
Nhlrc4Q3UP44 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Mir1247-201ENSMUST00000116706 82 ntBASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Gm43630-201ENSMUST00000201550 776 ntBASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Gm39404-201ENSMUST00000216350 313 ntBASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nhlrc4Q3UP44 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Gm13342-201ENSMUST00000121055 207 ntBASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Mospd4-201ENSMUST00000180618 576 ntBASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Gm27243-201ENSMUST00000183964 521 ntBASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Olfr284-202ENSMUST00000206647 966 ntBASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms