Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm28646-201ENSMUST00000188220 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm9230-201ENSMUST00000188228 532 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm28205-201ENSMUST00000189177 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm29032-201ENSMUST00000189797 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm28695-201ENSMUST00000190300 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm37448-201ENSMUST00000192795 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm7848-201ENSMUST00000210739 718 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Acot6-202ENSMUST00000222921 3622 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Gm12380-201ENSMUST00000119012 544 ntBASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 AY036118-201ENSMUST00000200021 923 ntBASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Gm29787-201ENSMUST00000222129 849 ntBASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.29□□□□□ -0.28
Upf3aQ3ULJ3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upf3aQ3ULJ3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 242.5 ms