Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Gm28071-201ENSMUST00000190355 478 ntBASIC17.29■□□□□ 0.36
Puf60Q3UEB3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Gm45118-201ENSMUST00000208928 825 ntBASIC17.29■□□□□ 0.36
Puf60Q3UEB3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Puf60Q3UEB3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Gm11450-201ENSMUST00000121144 333 ntBASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Gm5369-201ENSMUST00000217499 588 ntBASIC17.28■□□□□ 0.36
Puf60Q3UEB3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Spcs1-203ENSMUST00000226374 592 ntBASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Gm43045-201ENSMUST00000198725 2095 ntBASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Puf60Q3UEB3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Mir1943-201ENSMUST00000158276 73 ntBASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC17.27■□□□□ 0.36
Puf60Q3UEB3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Puf60Q3UEB3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Puf60Q3UEB3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Gm6210-201ENSMUST00000204734 1942 ntBASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Gm43962-201ENSMUST00000203898 190 ntBASIC17.26■□□□□ 0.35
Puf60Q3UEB3 CT009718.3-201ENSMUST00000221116 367 ntBASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Puf60Q3UEB3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms