Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcr5Q04683 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcr5Q04683 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.02□□□□□ -0.48
Cxcr5Q04683 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcr5Q04683 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcr5Q04683 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcr5Q04683 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcr5Q04683 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcr5Q04683 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Gm8805-201ENSMUST00000117848 313 ntBASIC12.02□□□□□ -0.49
Cxcr5Q04683 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Gm10576-201ENSMUST00000191927 825 ntBASIC12.02□□□□□ -0.49
Cxcr5Q04683 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.02□□□□□ -0.49
Cxcr5Q04683 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cxcr5Q04683 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Gm7488-201ENSMUST00000117148 684 ntBASIC12.01□□□□□ -0.49
Cxcr5Q04683 Gm13612-201ENSMUST00000119276 390 ntBASIC12.01□□□□□ -0.49
Cxcr5Q04683 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.01□□□□□ -0.49
Cxcr5Q04683 Gm14760-201ENSMUST00000121831 999 ntBASIC12.01□□□□□ -0.49
Cxcr5Q04683 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.01□□□□□ -0.49
Cxcr5Q04683 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcr5Q04683 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.01□□□□□ -0.49
Cxcr5Q04683 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12□□□□□ -0.49
Cxcr5Q04683 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcr5Q04683 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcr5Q04683 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcr5Q04683 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcr5Q04683 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cxcr5Q04683 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcr5Q04683 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Cxcr5Q04683 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcr5Q04683 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms