Protein–RNA interactions for Protein: Q02780

Nfia, Nuclear factor 1 A-type, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfiaQ02780 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NfiaQ02780 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NfiaQ02780 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
NfiaQ02780 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfiaQ02780 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.13□□□□□ -0.15
NfiaQ02780 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.12□□□□□ -0.15
NfiaQ02780 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.12□□□□□ -0.15
NfiaQ02780 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.12□□□□□ -0.15
NfiaQ02780 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NfiaQ02780 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NfiaQ02780 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.12□□□□□ -0.15
NfiaQ02780 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.12□□□□□ -0.15
NfiaQ02780 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Gm10076-201ENSMUST00000073238 384 ntBASIC14.12□□□□□ -0.15
NfiaQ02780 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NfiaQ02780 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NfiaQ02780 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NfiaQ02780 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NfiaQ02780 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NfiaQ02780 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NfiaQ02780 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
NfiaQ02780 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NfiaQ02780 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.11□□□□□ -0.15
NfiaQ02780 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.11□□□□□ -0.15
NfiaQ02780 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.11□□□□□ -0.15
NfiaQ02780 Gm11597-201ENSMUST00000121423 964 ntBASIC14.11□□□□□ -0.15
NfiaQ02780 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.11□□□□□ -0.15
NfiaQ02780 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.11□□□□□ -0.15
NfiaQ02780 Gm9550-201ENSMUST00000161130 862 ntBASIC14.11□□□□□ -0.15
NfiaQ02780 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.11□□□□□ -0.15
NfiaQ02780 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.11□□□□□ -0.15
NfiaQ02780 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.11□□□□□ -0.15
NfiaQ02780 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.11□□□□□ -0.15
NfiaQ02780 Spcs1-203ENSMUST00000226374 592 ntBASIC14.11□□□□□ -0.15
NfiaQ02780 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NfiaQ02780 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
NfiaQ02780 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.11□□□□□ -0.15
NfiaQ02780 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfiaQ02780 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.11□□□□□ -0.15
NfiaQ02780 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NfiaQ02780 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
NfiaQ02780 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
NfiaQ02780 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NfiaQ02780 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms