Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.58□□□□□ -0.56
Scn1bP97952 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Scn1bP97952 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.58□□□□□ -0.56
Scn1bP97952 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scn1bP97952 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.58□□□□□ -0.56
Scn1bP97952 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Scn1bP97952 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Scn1bP97952 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.57□□□□□ -0.56
Scn1bP97952 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Scn1bP97952 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.57□□□□□ -0.56
Scn1bP97952 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Scn1bP97952 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.57□□□□□ -0.56
Scn1bP97952 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.57□□□□□ -0.56
Scn1bP97952 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Scn1bP97952 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.57□□□□□ -0.56
Scn1bP97952 Gm25144-201ENSMUST00000179561 110 ntBASIC11.57□□□□□ -0.56
Scn1bP97952 Gm25352-201ENSMUST00000179815 110 ntBASIC11.57□□□□□ -0.56
Scn1bP97952 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.57□□□□□ -0.56
Scn1bP97952 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.57□□□□□ -0.56
Scn1bP97952 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Scn1bP97952 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.57□□□□□ -0.56
Scn1bP97952 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Scn1bP97952 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Scn1bP97952 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Scn1bP97952 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Scn1bP97952 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scn1bP97952 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Scn1bP97952 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Gm6912-201ENSMUST00000117218 544 ntBASIC11.56□□□□□ -0.56
Scn1bP97952 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.56□□□□□ -0.56
Scn1bP97952 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.56□□□□□ -0.56
Scn1bP97952 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Scn1bP97952 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Gm27618-201ENSMUST00000183671 60 ntBASIC11.56□□□□□ -0.56
Scn1bP97952 Gm44344-201ENSMUST00000200287 129 ntBASIC11.56□□□□□ -0.56
Scn1bP97952 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.56□□□□□ -0.56
Scn1bP97952 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Scn1bP97952 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.56□□□□□ -0.56
Scn1bP97952 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Scn1bP97952 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.56□□□□□ -0.56
Scn1bP97952 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Scn1bP97952 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scn1bP97952 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.56□□□□□ -0.56
Scn1bP97952 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Scn1bP97952 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms