Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Cacna1aP97445 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cacna1aP97445 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.69□□□□□ -0.54
Cacna1aP97445 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Gm15515-201ENSMUST00000117827 822 ntBASIC11.69□□□□□ -0.54
Cacna1aP97445 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.69□□□□□ -0.54
Cacna1aP97445 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.69□□□□□ -0.54
Cacna1aP97445 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Gm19994-201ENSMUST00000217086 586 ntBASIC11.69□□□□□ -0.54
Cacna1aP97445 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.69□□□□□ -0.54
Cacna1aP97445 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cacna1aP97445 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.68□□□□□ -0.54
Cacna1aP97445 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Gm17040-202ENSMUST00000170597 889 ntBASIC11.68□□□□□ -0.54
Cacna1aP97445 Gm23363-201ENSMUST00000175024 79 ntBASIC11.68□□□□□ -0.54
Cacna1aP97445 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.68□□□□□ -0.54
Cacna1aP97445 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.68□□□□□ -0.54
Cacna1aP97445 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.68□□□□□ -0.54
Cacna1aP97445 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cacna1aP97445 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms