Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.81■□□□□ 0.12
Nkx2-3P97334 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm23251-201ENSMUST00000103773 110 ntBASIC15.81■□□□□ 0.12
Nkx2-3P97334 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm12165-201ENSMUST00000117047 342 ntBASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm13035-201ENSMUST00000117496 342 ntBASIC15.81■□□□□ 0.12
Nkx2-3P97334 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm5733-201ENSMUST00000190232 939 ntBASIC15.81■□□□□ 0.12
Nkx2-3P97334 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm44958-201ENSMUST00000203734 736 ntBASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm5051-201ENSMUST00000204085 485 ntBASIC15.81■□□□□ 0.12
Nkx2-3P97334 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nkx2-3P97334 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.81■□□□□ 0.12
Nkx2-3P97334 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-3P97334 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.8■□□□□ 0.12
Nkx2-3P97334 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.8■□□□□ 0.12
Nkx2-3P97334 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Gm11509-201ENSMUST00000117358 325 ntBASIC15.8■□□□□ 0.12
Nkx2-3P97334 Gm7722-201ENSMUST00000120646 741 ntBASIC15.8■□□□□ 0.12
Nkx2-3P97334 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Gm37246-201ENSMUST00000192665 835 ntBASIC15.8■□□□□ 0.12
Nkx2-3P97334 Gm44126-201ENSMUST00000204831 514 ntBASIC15.8■□□□□ 0.12
Nkx2-3P97334 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.8■□□□□ 0.12
Nkx2-3P97334 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.8■□□□□ 0.12
Nkx2-3P97334 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-3P97334 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms