Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.28□□□□□ -0.6
H3f3aP84244 Gm38002-201ENSMUST00000193255 180 ntBASIC11.28□□□□□ -0.6
H3f3aP84244 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H3f3aP84244 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.28□□□□□ -0.6
H3f3aP84244 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.28□□□□□ -0.6
H3f3aP84244 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
H3f3aP84244 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
H3f3aP84244 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
H3f3aP84244 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H3f3aP84244 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
H3f3aP84244 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3aP84244 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3aP84244 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3aP84244 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3aP84244 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
H3f3aP84244 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3aP84244 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
H3f3aP84244 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3aP84244 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.27□□□□□ -0.6
H3f3aP84244 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3aP84244 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3aP84244 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
H3f3aP84244 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
H3f3aP84244 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.27□□□□□ -0.61
H3f3aP84244 Gm13392-201ENSMUST00000117708 150 ntBASIC11.27□□□□□ -0.61
H3f3aP84244 Gm11964-201ENSMUST00000120982 444 ntBASIC11.27□□□□□ -0.61
H3f3aP84244 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
H3f3aP84244 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.27□□□□□ -0.61
H3f3aP84244 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.27□□□□□ -0.61
H3f3aP84244 Gm43133-201ENSMUST00000197472 463 ntBASIC11.27□□□□□ -0.61
H3f3aP84244 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Gm18054-201ENSMUST00000207539 555 ntBASIC11.27□□□□□ -0.61
H3f3aP84244 Gm45930-201ENSMUST00000221330 292 ntBASIC11.27□□□□□ -0.61
H3f3aP84244 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.27□□□□□ -0.61
H3f3aP84244 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.27□□□□□ -0.61
H3f3aP84244 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
H3f3aP84244 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.27□□□□□ -0.61
H3f3aP84244 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
H3f3aP84244 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
H3f3aP84244 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
H3f3aP84244 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.27□□□□□ -0.61
H3f3aP84244 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.27□□□□□ -0.61
H3f3aP84244 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3aP84244 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
H3f3aP84244 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H3f3aP84244 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H3f3aP84244 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H3f3aP84244 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.26□□□□□ -0.61
H3f3aP84244 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H3f3aP84244 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
H3f3aP84244 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H3f3aP84244 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.26□□□□□ -0.61
H3f3aP84244 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.26□□□□□ -0.61
H3f3aP84244 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
H3f3aP84244 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
H3f3aP84244 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H3f3aP84244 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H3f3aP84244 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H3f3aP84244 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H3f3aP84244 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
H3f3aP84244 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms