Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SgcaP82350 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.63□□□□□ -0.71
SgcaP82350 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SgcaP82350 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcaP82350 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.62□□□□□ -0.71
SgcaP82350 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
SgcaP82350 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SgcaP82350 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.62□□□□□ -0.71
SgcaP82350 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
SgcaP82350 Gm3436-201ENSMUST00000179930 840 ntBASIC10.62□□□□□ -0.71
SgcaP82350 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.62□□□□□ -0.71
SgcaP82350 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SgcaP82350 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
SgcaP82350 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
SgcaP82350 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SgcaP82350 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcaP82350 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
SgcaP82350 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.61□□□□□ -0.71
SgcaP82350 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
SgcaP82350 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.61□□□□□ -0.71
SgcaP82350 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
SgcaP82350 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
SgcaP82350 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.61□□□□□ -0.71
SgcaP82350 Gm38144-201ENSMUST00000192790 465 ntBASIC10.61□□□□□ -0.71
SgcaP82350 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.61□□□□□ -0.71
SgcaP82350 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
SgcaP82350 Gm17795-201ENSMUST00000214505 757 ntBASIC10.61□□□□□ -0.71
SgcaP82350 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.61□□□□□ -0.71
SgcaP82350 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.61□□□□□ -0.71
SgcaP82350 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.61□□□□□ -0.71
SgcaP82350 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
SgcaP82350 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.61□□□□□ -0.71
SgcaP82350 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.61□□□□□ -0.71
SgcaP82350 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcaP82350 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcaP82350 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcaP82350 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcaP82350 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
SgcaP82350 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms