Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.79□□□□□ -0.52
SgcdP82347 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SgcdP82347 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SgcdP82347 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.79□□□□□ -0.52
SgcdP82347 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.79□□□□□ -0.52
SgcdP82347 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.79□□□□□ -0.52
SgcdP82347 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Gm24420-201ENSMUST00000176676 59 ntBASIC11.79□□□□□ -0.52
SgcdP82347 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SgcdP82347 Gm19220-201ENSMUST00000222682 803 ntBASIC11.79□□□□□ -0.52
SgcdP82347 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.79□□□□□ -0.52
SgcdP82347 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SgcdP82347 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcdP82347 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.79□□□□□ -0.52
SgcdP82347 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SgcdP82347 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.78□□□□□ -0.52
SgcdP82347 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SgcdP82347 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.78□□□□□ -0.52
SgcdP82347 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SgcdP82347 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SgcdP82347 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
SgcdP82347 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SgcdP82347 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Gm17150-201ENSMUST00000165577 381 ntBASIC11.78□□□□□ -0.52
SgcdP82347 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Gm27892-201ENSMUST00000185017 106 ntBASIC11.78□□□□□ -0.52
SgcdP82347 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SgcdP82347 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.78□□□□□ -0.52
SgcdP82347 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.78□□□□□ -0.52
SgcdP82347 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SgcdP82347 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SgcdP82347 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.78□□□□□ -0.52
SgcdP82347 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcdP82347 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
SgcdP82347 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.77□□□□□ -0.52
SgcdP82347 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.77□□□□□ -0.52
SgcdP82347 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.77□□□□□ -0.52
SgcdP82347 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcdP82347 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcdP82347 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms