Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC20.29■□□□□ 0.84
Cux2P70298 AC154305.4-201ENSMUST00000224520 614 ntBASIC20.29■□□□□ 0.84
Cux2P70298 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC20.29■□□□□ 0.84
Cux2P70298 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cux2P70298 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC20.28■□□□□ 0.84
Cux2P70298 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Gm5419-201ENSMUST00000119301 527 ntBASIC20.28■□□□□ 0.84
Cux2P70298 Gm14247-201ENSMUST00000120950 237 ntBASIC20.28■□□□□ 0.84
Cux2P70298 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cux2P70298 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Cux2P70298 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cux2P70298 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Cux2P70298 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cux2P70298 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC20.28■□□□□ 0.84
Cux2P70298 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Cux2P70298 Gm25604-201ENSMUST00000158359 133 ntBASIC20.27■□□□□ 0.84
Cux2P70298 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC20.27■□□□□ 0.84
Cux2P70298 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC20.27■□□□□ 0.84
Cux2P70298 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cux2P70298 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cux2P70298 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cux2P70298 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC20.27■□□□□ 0.84
Cux2P70298 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cux2P70298 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cux2P70298 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cux2P70298 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cux2P70298 AC154671.1-201ENSMUST00000228617 1578 ntBASIC20.27■□□□□ 0.84
Cux2P70298 Gm5380-201ENSMUST00000119296 2136 ntBASIC20.27■□□□□ 0.84
Cux2P70298 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cux2P70298 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cux2P70298 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Cux2P70298 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Cux2P70298 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cux2P70298 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC20.27■□□□□ 0.84
Cux2P70298 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cux2P70298 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cux2P70298 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cux2P70298 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Cux2P70298 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cux2P70298 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.83
Cux2P70298 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cux2P70298 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cux2P70298 Gm3726-201ENSMUST00000203110 785 ntBASIC20.27■□□□□ 0.83
Cux2P70298 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cux2P70298 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Gm17213-201ENSMUST00000165161 1360 ntBASIC20.26■□□□□ 0.83
Cux2P70298 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC20.26■□□□□ 0.83
Cux2P70298 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Il17rd-203ENSMUST00000225146 3366 ntBASIC20.26■□□□□ 0.83
Cux2P70298 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cux2P70298 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cux2P70298 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cux2P70298 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cux2P70298 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cux2P70298 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cux2P70298 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cux2P70298 Gm9135-201ENSMUST00000182963 990 ntBASIC20.26■□□□□ 0.83
Cux2P70298 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 AC153962.2-201ENSMUST00000219417 550 ntBASIC20.26■□□□□ 0.83
Cux2P70298 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cux2P70298 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cux2P70298 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cux2P70298 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cux2P70298 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms