Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Lsm3P62311 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Lsm3P62311 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Lsm3P62311 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.5□□□□□ -0.57
Lsm3P62311 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Lsm3P62311 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Lsm3P62311 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm3P62311 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.49□□□□□ -0.57
Lsm3P62311 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.49□□□□□ -0.57
Lsm3P62311 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.49□□□□□ -0.57
Lsm3P62311 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.49□□□□□ -0.57
Lsm3P62311 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.49□□□□□ -0.57
Lsm3P62311 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lsm3P62311 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.49□□□□□ -0.57
Lsm3P62311 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.49□□□□□ -0.57
Lsm3P62311 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm3P62311 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lsm3P62311 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.49□□□□□ -0.57
Lsm3P62311 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.49□□□□□ -0.57
Lsm3P62311 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Lsm3P62311 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Lsm3P62311 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm3P62311 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lsm3P62311 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Lsm3P62311 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm3P62311 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lsm3P62311 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.48□□□□□ -0.57
Lsm3P62311 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.48□□□□□ -0.57
Lsm3P62311 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lsm3P62311 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.48□□□□□ -0.57
Lsm3P62311 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.48□□□□□ -0.57
Lsm3P62311 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.48□□□□□ -0.57
Lsm3P62311 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.48□□□□□ -0.57
Lsm3P62311 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.48□□□□□ -0.57
Lsm3P62311 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.48□□□□□ -0.57
Lsm3P62311 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Lsm3P62311 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lsm3P62311 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Lsm3P62311 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.48□□□□□ -0.57
Lsm3P62311 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.48□□□□□ -0.57
Lsm3P62311 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.48□□□□□ -0.57
Lsm3P62311 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Lsm3P62311 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm3P62311 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.47□□□□□ -0.57
Lsm3P62311 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms