Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nup43P59235 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Nup43P59235 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Nup43P59235 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Nup43P59235 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.96□□□□□ -0.5
Nup43P59235 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nup43P59235 Daam2-202ENSMUST00000224595 1926 ntBASIC11.96□□□□□ -0.5
Nup43P59235 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nup43P59235 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.95□□□□□ -0.5
Nup43P59235 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nup43P59235 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup43P59235 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup43P59235 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.95□□□□□ -0.5
Nup43P59235 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.95□□□□□ -0.5
Nup43P59235 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Nup43P59235 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.95□□□□□ -0.5
Nup43P59235 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup43P59235 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup43P59235 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nup43P59235 Gm22058-201ENSMUST00000083393 310 ntBASIC11.95□□□□□ -0.5
Nup43P59235 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nup43P59235 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nup43P59235 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nup43P59235 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup43P59235 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.95□□□□□ -0.5
Nup43P59235 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.95□□□□□ -0.5
Nup43P59235 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup43P59235 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.94□□□□□ -0.5
Nup43P59235 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.94□□□□□ -0.5
Nup43P59235 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.94□□□□□ -0.5
Nup43P59235 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.94□□□□□ -0.5
Nup43P59235 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nup43P59235 Gm42627-201ENSMUST00000197347 224 ntBASIC11.94□□□□□ -0.5
Nup43P59235 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nup43P59235 Gm18054-201ENSMUST00000207539 555 ntBASIC11.94□□□□□ -0.5
Nup43P59235 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.94□□□□□ -0.5
Nup43P59235 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.94□□□□□ -0.5
Nup43P59235 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nup43P59235 Gm9823-201ENSMUST00000051212 327 ntBASIC11.94□□□□□ -0.5
Nup43P59235 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nup43P59235 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nup43P59235 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.94□□□□□ -0.5
Nup43P59235 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nup43P59235 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup43P59235 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms