Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.57□□□□□ -0.08
Tpm2P58774 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 CT025681.1-201ENSMUST00000225453 1855 ntBASIC14.57□□□□□ -0.08
Tpm2P58774 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.56□□□□□ -0.08
Tpm2P58774 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Tpm2P58774 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Tpm2P58774 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Tpm2P58774 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.56□□□□□ -0.08
Tpm2P58774 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.56□□□□□ -0.08
Tpm2P58774 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC14.56□□□□□ -0.08
Tpm2P58774 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 AC131586.1-201ENSMUST00000228844 2964 ntBASIC14.56□□□□□ -0.08
Tpm2P58774 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Tpm2P58774 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC14.56□□□□□ -0.08
Tpm2P58774 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm2P58774 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm2P58774 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm2P58774 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Tpm2P58774 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tpm2P58774 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.55□□□□□ -0.08
Tpm2P58774 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.55□□□□□ -0.08
Tpm2P58774 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Tpm2P58774 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tpm2P58774 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm2P58774 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm2P58774 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tpm2P58774 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tpm2P58774 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Tpm2P58774 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.54□□□□□ -0.08
Tpm2P58774 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.54□□□□□ -0.08
Tpm2P58774 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Tpm2P58774 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Tpm2P58774 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tpm2P58774 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.54□□□□□ -0.08
Tpm2P58774 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tpm2P58774 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm2P58774 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Tpm2P58774 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms