Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
CtskP55097 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CtskP55097 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtskP55097 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CtskP55097 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CtskP55097 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CtskP55097 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CtskP55097 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.47□□□□□ -0.41
CtskP55097 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.47□□□□□ -0.41
CtskP55097 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.47□□□□□ -0.41
CtskP55097 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.47□□□□□ -0.41
CtskP55097 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.47□□□□□ -0.41
CtskP55097 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CtskP55097 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtskP55097 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.46□□□□□ -0.41
CtskP55097 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.46□□□□□ -0.41
CtskP55097 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CtskP55097 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.46□□□□□ -0.41
CtskP55097 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.46□□□□□ -0.41
CtskP55097 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.46□□□□□ -0.41
CtskP55097 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.46□□□□□ -0.41
CtskP55097 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.46□□□□□ -0.41
CtskP55097 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CtskP55097 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.46□□□□□ -0.41
CtskP55097 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CtskP55097 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.46□□□□□ -0.41
CtskP55097 Mir433-201ENSMUST00000093564 124 ntBASIC12.46□□□□□ -0.41
CtskP55097 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CtskP55097 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CtskP55097 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
CtskP55097 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CtskP55097 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CtskP55097 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CtskP55097 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CtskP55097 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CtskP55097 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CtskP55097 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
CtskP55097 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CtskP55097 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CtskP55097 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.46□□□□□ -0.42
CtskP55097 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CtskP55097 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CtskP55097 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CtskP55097 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms