Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.49□□□□□ -0.25
NrlP54846 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.49□□□□□ -0.25
NrlP54846 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NrlP54846 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.48□□□□□ -0.25
NrlP54846 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NrlP54846 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.48□□□□□ -0.25
NrlP54846 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.48□□□□□ -0.25
NrlP54846 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NrlP54846 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.48□□□□□ -0.25
NrlP54846 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.48□□□□□ -0.25
NrlP54846 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NrlP54846 Gm14208-201ENSMUST00000119645 678 ntBASIC13.48□□□□□ -0.25
NrlP54846 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.48□□□□□ -0.25
NrlP54846 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.48□□□□□ -0.25
NrlP54846 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.48□□□□□ -0.25
NrlP54846 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
NrlP54846 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.48□□□□□ -0.25
NrlP54846 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
NrlP54846 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.48□□□□□ -0.25
NrlP54846 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.48□□□□□ -0.25
NrlP54846 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.48□□□□□ -0.25
NrlP54846 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NrlP54846 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NrlP54846 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NrlP54846 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.48□□□□□ -0.25
NrlP54846 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
NrlP54846 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.48□□□□□ -0.25
NrlP54846 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NrlP54846 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NrlP54846 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
NrlP54846 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
NrlP54846 Gm13736-201ENSMUST00000119272 253 ntBASIC13.47□□□□□ -0.25
NrlP54846 Gm12291-201ENSMUST00000121627 311 ntBASIC13.47□□□□□ -0.25
NrlP54846 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NrlP54846 Gm25700-201ENSMUST00000177693 110 ntBASIC13.47□□□□□ -0.25
NrlP54846 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.47□□□□□ -0.25
NrlP54846 Gm37201-201ENSMUST00000191845 523 ntBASIC13.47□□□□□ -0.25
NrlP54846 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.47□□□□□ -0.25
NrlP54846 Gm44262-201ENSMUST00000204969 372 ntBASIC13.47□□□□□ -0.25
NrlP54846 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.47□□□□□ -0.25
NrlP54846 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.47□□□□□ -0.25
NrlP54846 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NrlP54846 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms