Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ddx6P54823 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Ddx6P54823 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx6P54823 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx6P54823 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.85□□□□□ -0.35
Ddx6P54823 Mir5120-201ENSMUST00000175020 78 ntBASIC12.85□□□□□ -0.35
Ddx6P54823 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx6P54823 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.85□□□□□ -0.35
Ddx6P54823 Gm17812-201ENSMUST00000204935 318 ntBASIC12.85□□□□□ -0.35
Ddx6P54823 Gm45224-201ENSMUST00000208203 414 ntBASIC12.85□□□□□ -0.35
Ddx6P54823 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx6P54823 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx6P54823 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ddx6P54823 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx6P54823 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ddx6P54823 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ddx6P54823 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx6P54823 Acot6-202ENSMUST00000222921 3622 ntBASIC12.85□□□□□ -0.35
Ddx6P54823 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Ddx6P54823 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ddx6P54823 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ddx6P54823 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.84□□□□□ -0.35
Ddx6P54823 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.84□□□□□ -0.35
Ddx6P54823 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.84□□□□□ -0.35
Ddx6P54823 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.84□□□□□ -0.35
Ddx6P54823 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ddx6P54823 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ddx6P54823 Gm28450-201ENSMUST00000187349 638 ntBASIC12.84□□□□□ -0.35
Ddx6P54823 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.84□□□□□ -0.35
Ddx6P54823 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.84□□□□□ -0.35
Ddx6P54823 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ddx6P54823 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Ddx6P54823 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Ddx6P54823 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx6P54823 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ddx6P54823 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ddx6P54823 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ddx6P54823 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Ddx6P54823 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.83□□□□□ -0.36
Ddx6P54823 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.83□□□□□ -0.36
Ddx6P54823 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.83□□□□□ -0.36
Ddx6P54823 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx6P54823 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.83□□□□□ -0.36
Ddx6P54823 Gm42937-201ENSMUST00000197360 752 ntBASIC12.83□□□□□ -0.36
Ddx6P54823 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms