Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Atxn1P54254 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Atxn1P54254 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Atxn1P54254 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.59□□□□□ -0.39
Atxn1P54254 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Gm13996-201ENSMUST00000118456 430 ntBASIC12.59□□□□□ -0.39
Atxn1P54254 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.59□□□□□ -0.39
Atxn1P54254 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.59□□□□□ -0.39
Atxn1P54254 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.59□□□□□ -0.39
Atxn1P54254 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.59□□□□□ -0.39
Atxn1P54254 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.59□□□□□ -0.39
Atxn1P54254 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.59□□□□□ -0.39
Atxn1P54254 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Atxn1P54254 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.59□□□□□ -0.39
Atxn1P54254 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atxn1P54254 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atxn1P54254 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.59□□□□□ -0.39
Atxn1P54254 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Atxn1P54254 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atxn1P54254 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Atxn1P54254 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atxn1P54254 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Atxn1P54254 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atxn1P54254 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atxn1P54254 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Atxn1P54254 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.58□□□□□ -0.4
Atxn1P54254 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Gm13408-201ENSMUST00000119822 798 ntBASIC12.58□□□□□ -0.4
Atxn1P54254 Gm13935-201ENSMUST00000121859 798 ntBASIC12.58□□□□□ -0.4
Atxn1P54254 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.58□□□□□ -0.4
Atxn1P54254 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atxn1P54254 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.58□□□□□ -0.4
Atxn1P54254 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.58□□□□□ -0.4
Atxn1P54254 Gm10752-201ENSMUST00000218348 729 ntBASIC12.58□□□□□ -0.4
Atxn1P54254 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.58□□□□□ -0.4
Atxn1P54254 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Atxn1P54254 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Atxn1P54254 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Atxn1P54254 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Atxn1P54254 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Atxn1P54254 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atxn1P54254 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atxn1P54254 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Atxn1P54254 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.57□□□□□ -0.4
Atxn1P54254 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.57□□□□□ -0.4
Atxn1P54254 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Atxn1P54254 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Atxn1P54254 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms