Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox3P53784 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Sox3P53784 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sox3P53784 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox3P53784 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.15□□□□□ -0.46
Sox3P53784 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sox3P53784 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 Mir698-201ENSMUST00000102164 109 ntBASIC12.15□□□□□ -0.46
Sox3P53784 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Sox3P53784 Gm3890-201ENSMUST00000182416 207 ntBASIC12.15□□□□□ -0.46
Sox3P53784 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Gm37835-201ENSMUST00000193305 361 ntBASIC12.15□□□□□ -0.46
Sox3P53784 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox3P53784 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.15□□□□□ -0.46
Sox3P53784 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.15□□□□□ -0.46
Sox3P53784 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.15□□□□□ -0.46
Sox3P53784 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox3P53784 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox3P53784 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox3P53784 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.15□□□□□ -0.47
Sox3P53784 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox3P53784 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sox3P53784 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox3P53784 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sox3P53784 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.14□□□□□ -0.47
Sox3P53784 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox3P53784 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.14□□□□□ -0.47
Sox3P53784 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Pck2-205ENSMUST00000226352 2784 ntBASIC12.14□□□□□ -0.47
Sox3P53784 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Sox3P53784 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.14□□□□□ -0.47
Sox3P53784 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Sox3P53784 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox3P53784 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Gm14277-201ENSMUST00000121195 360 ntBASIC12.14□□□□□ -0.47
Sox3P53784 Gm13123-201ENSMUST00000122173 492 ntBASIC12.14□□□□□ -0.47
Sox3P53784 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sox3P53784 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.14□□□□□ -0.47
Sox3P53784 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Sox3P53784 Gm29608-201ENSMUST00000190444 463 ntBASIC12.14□□□□□ -0.47
Sox3P53784 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox3P53784 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox3P53784 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.14□□□□□ -0.47
Sox3P53784 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox3P53784 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox3P53784 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sox3P53784 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms