Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox1P53783 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox1P53783 Gm14034-201ENSMUST00000120147 551 ntBASIC12.9□□□□□ -0.34
Sox1P53783 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox1P53783 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.9□□□□□ -0.34
Sox1P53783 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox1P53783 Gm23085-201ENSMUST00000157849 293 ntBASIC12.9□□□□□ -0.34
Sox1P53783 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox1P53783 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.9□□□□□ -0.34
Sox1P53783 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.9□□□□□ -0.34
Sox1P53783 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.9□□□□□ -0.34
Sox1P53783 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.9□□□□□ -0.34
Sox1P53783 Mir8115-201ENSMUST00000184992 119 ntBASIC12.9□□□□□ -0.34
Sox1P53783 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox1P53783 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox1P53783 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.9□□□□□ -0.34
Sox1P53783 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.9□□□□□ -0.34
Sox1P53783 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox1P53783 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox1P53783 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.9□□□□□ -0.34
Sox1P53783 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox1P53783 Gm4604-201ENSMUST00000025040 390 ntBASIC12.9□□□□□ -0.34
Sox1P53783 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.9□□□□□ -0.34
Sox1P53783 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sox1P53783 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.9□□□□□ -0.34
Sox1P53783 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sox1P53783 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.9□□□□□ -0.34
Sox1P53783 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox1P53783 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sox1P53783 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sox1P53783 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sox1P53783 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox1P53783 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.89□□□□□ -0.35
Sox1P53783 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Sox1P53783 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sox1P53783 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sox1P53783 Gm6754-201ENSMUST00000117124 913 ntBASIC12.89□□□□□ -0.35
Sox1P53783 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Sox1P53783 Gm18201-201ENSMUST00000174735 875 ntBASIC12.89□□□□□ -0.35
Sox1P53783 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.89□□□□□ -0.35
Sox1P53783 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.89□□□□□ -0.35
Sox1P53783 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.89□□□□□ -0.35
Sox1P53783 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.89□□□□□ -0.35
Sox1P53783 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox1P53783 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox1P53783 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox1P53783 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox1P53783 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox1P53783 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.89□□□□□ -0.35
Sox1P53783 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms