Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.93□□□□□ -0.34
SftpbP50405 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SftpbP50405 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SftpbP50405 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
SftpbP50405 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.93□□□□□ -0.34
SftpbP50405 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Gm13123-201ENSMUST00000122173 492 ntBASIC12.93□□□□□ -0.34
SftpbP50405 Gm27701-201ENSMUST00000184498 110 ntBASIC12.93□□□□□ -0.34
SftpbP50405 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.93□□□□□ -0.34
SftpbP50405 Gm8598-201ENSMUST00000221184 836 ntBASIC12.93□□□□□ -0.34
SftpbP50405 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.93□□□□□ -0.34
SftpbP50405 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.93□□□□□ -0.34
SftpbP50405 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SftpbP50405 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SftpbP50405 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SftpbP50405 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.92□□□□□ -0.34
SftpbP50405 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SftpbP50405 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
SftpbP50405 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.92□□□□□ -0.34
SftpbP50405 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Gm14704-201ENSMUST00000120300 874 ntBASIC12.92□□□□□ -0.34
SftpbP50405 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Gm12091-201ENSMUST00000146791 830 ntBASIC12.92□□□□□ -0.34
SftpbP50405 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Gm10576-201ENSMUST00000191927 825 ntBASIC12.92□□□□□ -0.34
SftpbP50405 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.92□□□□□ -0.34
SftpbP50405 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SftpbP50405 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.92□□□□□ -0.34
SftpbP50405 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SftpbP50405 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SftpbP50405 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpbP50405 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.91□□□□□ -0.34
SftpbP50405 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SftpbP50405 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SftpbP50405 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.91□□□□□ -0.34
SftpbP50405 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.91□□□□□ -0.34
SftpbP50405 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.91□□□□□ -0.34
SftpbP50405 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Gm13612-201ENSMUST00000119276 390 ntBASIC12.91□□□□□ -0.34
SftpbP50405 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.91□□□□□ -0.34
SftpbP50405 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.91□□□□□ -0.34
SftpbP50405 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.91□□□□□ -0.34
SftpbP50405 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Proscos-202ENSMUST00000178990 666 ntBASIC12.91□□□□□ -0.34
SftpbP50405 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.91□□□□□ -0.34
SftpbP50405 Gm18018-201ENSMUST00000198273 408 ntBASIC12.91□□□□□ -0.34
SftpbP50405 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SftpbP50405 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SftpbP50405 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.91□□□□□ -0.34
SftpbP50405 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms