Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rfx2P48379 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx2P48379 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx2P48379 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx2P48379 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx2P48379 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx2P48379 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx2P48379 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx2P48379 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx2P48379 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx2P48379 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Rfx2P48379 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx2P48379 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfx2P48379 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Rfx2P48379 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Gm12502-201ENSMUST00000120197 444 ntBASIC13.27□□□□□ -0.29
Rfx2P48379 Gm11964-201ENSMUST00000120982 444 ntBASIC13.27□□□□□ -0.29
Rfx2P48379 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.27□□□□□ -0.29
Rfx2P48379 Gm20482-202ENSMUST00000174729 825 ntBASIC13.27□□□□□ -0.29
Rfx2P48379 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.27□□□□□ -0.29
Rfx2P48379 Gm4857-201ENSMUST00000192718 785 ntBASIC13.27□□□□□ -0.29
Rfx2P48379 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.27□□□□□ -0.29
Rfx2P48379 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfx2P48379 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.27□□□□□ -0.29
Rfx2P48379 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfx2P48379 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rfx2P48379 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rfx2P48379 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfx2P48379 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.27□□□□□ -0.29
Rfx2P48379 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rfx2P48379 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfx2P48379 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfx2P48379 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.27□□□□□ -0.29
Rfx2P48379 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx2P48379 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rfx2P48379 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Gm24255-201ENSMUST00000104481 128 ntBASIC13.26□□□□□ -0.29
Rfx2P48379 Mir877-201ENSMUST00000104738 85 ntBASIC13.26□□□□□ -0.29
Rfx2P48379 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.26□□□□□ -0.29
Rfx2P48379 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.26□□□□□ -0.29
Rfx2P48379 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.26□□□□□ -0.29
Rfx2P48379 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.26□□□□□ -0.29
Rfx2P48379 Gm25668-201ENSMUST00000157700 129 ntBASIC13.26□□□□□ -0.29
Rfx2P48379 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Gm22121-201ENSMUST00000175148 54 ntBASIC13.26□□□□□ -0.29
Rfx2P48379 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.26□□□□□ -0.29
Rfx2P48379 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rfx2P48379 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rfx2P48379 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.26□□□□□ -0.29
Rfx2P48379 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Gm5904-201ENSMUST00000210286 865 ntBASIC13.26□□□□□ -0.29
Rfx2P48379 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.26□□□□□ -0.29
Rfx2P48379 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx2P48379 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms