Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist1h1dP43277 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.7□□□□□ -0.7
Hist1h1dP43277 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.7□□□□□ -0.7
Hist1h1dP43277 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.7□□□□□ -0.7
Hist1h1dP43277 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.7□□□□□ -0.7
Hist1h1dP43277 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.7□□□□□ -0.7
Hist1h1dP43277 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Gm5867-201ENSMUST00000063197 592 ntBASIC10.7□□□□□ -0.7
Hist1h1dP43277 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist1h1dP43277 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.69□□□□□ -0.7
Hist1h1dP43277 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Gm11618-201ENSMUST00000117946 267 ntBASIC10.69□□□□□ -0.7
Hist1h1dP43277 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Gm14704-201ENSMUST00000120300 874 ntBASIC10.69□□□□□ -0.7
Hist1h1dP43277 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Gm10576-201ENSMUST00000191927 825 ntBASIC10.69□□□□□ -0.7
Hist1h1dP43277 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.69□□□□□ -0.7
Hist1h1dP43277 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.69□□□□□ -0.7
Hist1h1dP43277 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist1h1dP43277 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.68□□□□□ -0.7
Hist1h1dP43277 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1dP43277 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms