Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.05□□□□□ -0.32
Msh2P43247 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Msh2P43247 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.05□□□□□ -0.32
Msh2P43247 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.05□□□□□ -0.32
Msh2P43247 Gm27839-201ENSMUST00000184242 106 ntBASIC13.05□□□□□ -0.32
Msh2P43247 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Msh2P43247 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Msh2P43247 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.05□□□□□ -0.32
Msh2P43247 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Msh2P43247 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Msh2P43247 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Msh2P43247 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Msh2P43247 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Msh2P43247 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Msh2P43247 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.04□□□□□ -0.32
Msh2P43247 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Gm11814-201ENSMUST00000119515 929 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.04□□□□□ -0.32
Msh2P43247 Gm8652-201ENSMUST00000181363 964 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Gm8602-201ENSMUST00000184045 607 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Gm27486-201ENSMUST00000184923 80 ntBASIC13.04□□□□□ -0.32
Msh2P43247 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.04□□□□□ -0.32
Msh2P43247 Gm8598-201ENSMUST00000221184 836 ntBASIC13.04□□□□□ -0.32
Msh2P43247 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Msh2P43247 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.04□□□□□ -0.32
Msh2P43247 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Msh2P43247 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Msh2P43247 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Msh2P43247 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.04□□□□□ -0.32
Msh2P43247 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Msh2P43247 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Msh2P43247 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msh2P43247 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.03□□□□□ -0.32
Msh2P43247 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msh2P43247 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Msh2P43247 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msh2P43247 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.03□□□□□ -0.32
Msh2P43247 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msh2P43247 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.03□□□□□ -0.32
Msh2P43247 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msh2P43247 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msh2P43247 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Msh2P43247 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.03□□□□□ -0.32
Msh2P43247 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Msh2P43247 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msh2P43247 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Msh2P43247 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Msh2P43247 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Msh2P43247 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Msh2P43247 Gm14350-201ENSMUST00000116642 640 ntBASIC13.03□□□□□ -0.32
Msh2P43247 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.03□□□□□ -0.32
Msh2P43247 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.03□□□□□ -0.32
Msh2P43247 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.03□□□□□ -0.32
Msh2P43247 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.03□□□□□ -0.32
Msh2P43247 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms