Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC8.52□□□□□ -1.05
Rpl28P41105 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Syt7-204ENSMUST00000223586 1344 ntBASIC8.52□□□□□ -1.05
Rpl28P41105 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rpl28P41105 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC8.51□□□□□ -1.05
Rpl28P41105 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Rpl28P41105 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Rpl28P41105 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Gm37849-201ENSMUST00000194722 1881 ntBASIC8.51□□□□□ -1.05
Rpl28P41105 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
Rpl28P41105 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
Rpl28P41105 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
Rpl28P41105 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Gm38144-201ENSMUST00000192790 465 ntBASIC8.51□□□□□ -1.05
Rpl28P41105 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC8.51□□□□□ -1.05
Rpl28P41105 Gm35960-201ENSMUST00000202712 767 ntBASIC8.51□□□□□ -1.05
Rpl28P41105 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC8.51□□□□□ -1.05
Rpl28P41105 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Wdyhv1-203ENSMUST00000226889 394 ntBASIC8.51□□□□□ -1.05
Rpl28P41105 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC8.51□□□□□ -1.05
Rpl28P41105 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC8.51□□□□□ -1.05
Rpl28P41105 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Rpl28P41105 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Gm44831-201ENSMUST00000208469 2989 ntBASIC8.51□□□□□ -1.05
Rpl28P41105 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Rpl28P41105 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC8.51□□□□□ -1.05
Rpl28P41105 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rpl28P41105 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Rpl28P41105 Gm38037-201ENSMUST00000192600 1624 ntBASIC8.51□□□□□ -1.05
Rpl28P41105 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC8.51□□□□□ -1.05
Rpl28P41105 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC8.5□□□□□ -1.05
Rpl28P41105 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Rpl28P41105 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Gm43075-201ENSMUST00000198613 3905 ntBASIC8.5□□□□□ -1.05
Rpl28P41105 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Rpl28P41105 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Rpl28P41105 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms