Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
TfamP40630 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TfamP40630 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TfamP40630 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Gm11803-201ENSMUST00000119966 444 ntBASIC12.26□□□□□ -0.45
TfamP40630 Gm14704-201ENSMUST00000120300 874 ntBASIC12.26□□□□□ -0.45
TfamP40630 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
TfamP40630 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TfamP40630 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TfamP40630 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.26□□□□□ -0.45
TfamP40630 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
TfamP40630 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.26□□□□□ -0.45
TfamP40630 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TfamP40630 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TfamP40630 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TfamP40630 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TfamP40630 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
TfamP40630 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TfamP40630 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TfamP40630 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.25□□□□□ -0.45
TfamP40630 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Gm16479-201ENSMUST00000121706 932 ntBASIC12.25□□□□□ -0.45
TfamP40630 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.25□□□□□ -0.45
TfamP40630 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
TfamP40630 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.25□□□□□ -0.45
TfamP40630 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TfamP40630 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TfamP40630 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.25□□□□□ -0.45
TfamP40630 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.25□□□□□ -0.45
TfamP40630 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.25□□□□□ -0.45
TfamP40630 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TfamP40630 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.24□□□□□ -0.45
TfamP40630 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TfamP40630 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
TfamP40630 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.24□□□□□ -0.45
TfamP40630 Gm14921-201ENSMUST00000118643 908 ntBASIC12.24□□□□□ -0.45
TfamP40630 Gm13369-201ENSMUST00000119442 987 ntBASIC12.24□□□□□ -0.45
TfamP40630 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.24□□□□□ -0.45
TfamP40630 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.24□□□□□ -0.45
TfamP40630 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.24□□□□□ -0.45
TfamP40630 Gm26185-201ENSMUST00000157692 266 ntBASIC12.24□□□□□ -0.45
TfamP40630 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TfamP40630 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.24□□□□□ -0.45
TfamP40630 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TfamP40630 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.24□□□□□ -0.45
TfamP40630 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms